Special Feature

User Panel

My Panel

My Panel

Bookmark Science Articles

Recent News
Bookmark / Share This Science Site

Protein Microarray Review


1. Gygi SP, Rochon Y, Franza B, Abersold R: Correlation between protein and mRNA
abundance in yeast. Mol. Cell Biol. 19, 1720-1730 (1999).

2. Le Naour, F., L. Hohenkirk, A. Grolleau, D.E. Misek, P. Lescure, J.D.
Geiger, S. Hanash, and L. Beretta. 2001. Profiling changes in gene expression
during differentiation and maturation of monocyte-derived dendritic
cells using both oligonucleotide microarrays and proteomics. J. Biol. Chem.

3. Anderson, L. and J. Seilhamer. 1997. A comparison of selected mRNA and protein abundances in human liver. Electrophoresis 18:533-537.

4,  McCarthy, J.E. 1998. Posttranscriptional control of gene expression in yeast.
Microbiol. Mol. Biol. Rev. 62:1492-1553.


5, Parekh, R.B. and C. Rohlff. 1997. Post-translational modification of proteins
and the discovery of new medicine. Curr. Opin. Biotechnol. 8:718-

6. Marcotte, E.M. 2001. Measuring the dynamics of the proteome. Genome Res. 11:191-193.

7. Mitchell P.. A perspective on protein microarrays. Nat Biotechnol. 2002 Mar;20(3):225-9

8. Zhu H, Snyder M. Protein chip technology. Curr Opin Chem Biol. 2003 Feb;7(1):55-63.

9. Talapatra A, Rouse R, Hardiman G.  Protein microarrays: challenges and promises. Pharmacogenomics. 2002 Jul;3(4):527-36.

10. Mitchell P: A perspective on protein microarrays. Nat .Biotech. 20, 225-229 (2002).

11. Service RF: Searching for recipes for protein arrays. Science 294, 2080-2082 (2001).

12. Cahill D: Protein arrays: a high-throughput solution for proteomics research? Proteomics: A Trends Guide 47-51 (2000).

13. Ekins, R. 1990. Measurement of free hormones in blood. Endocr. Rev. 11:5-

14. Ekins, R., F. Chu, and E. Biggart. 1990. Multispot, multianalyte, immunoassay.
Ann. Biol. Clin. 48:655-666.
15. Ekins, R.P. 1998. Ligand assays: from electrophoresis to miniaturized microarrays.
Clin. Chem. 44:2015-2030.

16. Templin, M.F., D. Stoll, M. Schrenk, P.C. Traub, C.F. Vohringer, and T.O. Joos. 2002. Protein microarray technology. Trends Biotechnol. 20:160-166.

17. Kusnezow W, Hoheisel JD. Antibody microarrays: promises and problems. Biotechniques. 2002 Dec;Suppl:14-23.

18. Emili, A.Q. and G. Cagney. 2000. Large-scale functional analysis using peptide or protein arrays. Nat. Biotechnol. 18:393-397.

19. Laurell, T. and G. Marko-Varga. 2002. Miniaturisation is mandatory unravelling
the human proteome. Proteomics 2:345-351.

20. Mendoza, L.G., P. McQuary, A. Mongan, R. Gangadharan, S. Brignac, and
M. Eggers. 1999. High-throughput microarray-based enzyme-linked immunosorbent
assay (ELISA). BioTechniques 27:778-788.

21. Uetz, P., L. Giot, G. Cagney, T.A. Mansfield, R.S. Judson, J.R. Knight, D.
Lockshon, V. Narayan, et al. 2000. A comprehensive analysis of proteinprotein
interactions in Saccharomyces cerevisiae. Nature 403:623-627.

22. Ge, H. 2000. UPA, a universal protein array system for quantitative detection
of protein-protein, protein-DNA, protein-RNA and protein-ligand interactions.
Nucleic Acids Res. 28:e3.

23. Bussow, K., D. Cahill, W. Nietfeld, D. Bancroft, E. Scherzinger, H. Lehrach, and G. Walter. 1998. A method for global protein expression and antibody screening on high-density filters of an arrayed cDNA library. Nucleic Acids Res. 26:5007-5008.

24.  Figeys D: Array and lab on an array technology for protein characterization.
Curr. Opin. Mol. Ther. 1(6), 685-694 (1999).

25. Sanders GHW, Manz A: Array-based microsystems for genomic and proteomic
analysis. Trends in Analytical Chemistry 19, 364-378 (2000).

26. H. Zhu, M. Bilgin, R. Bangham, D. Hall, A. Casamayor, P. Bertone, N. Lan, R. Jansen, S. Bidlingmaier, T. Houfek et al., Global analysis of protein activities using proteome chips. Science 293 (2001), pp. 2101–2105.

27. Zhu H, Snyder M. Protein arrays and microarrays. Curr Opin Chem Biol. 2001 Feb;5(1):40-5.

28. Arenkov, P., A. Kukhtin, A. Gemmell, S. Voloshchuk, V. Chupeeva, and A.
Mirzabekov. 2000. Protein microchips: use for immunoassay and enzymatic
reactions. Anal. Biochem. 278:123-131.
29. Guschin, D., G. Yershov, A. Zaslavsky, A. Gemmell, V. Shick, D. Proudnikov,
P. Arenkov, and A. Mirzabekov. 1997. Manual manufacturing of
oligonucleotide, DNA, and protein microchips. Anal. Biochem. 250:203-

30. Vasiliskov, A.V., E.N. Timofeev, S.A. Surzhikov, A.L. Drobyshev, V.V. Shick, and A.D. Mirzabekov. 1999. Fabrication of microarray of gel-immobilized compounds on a chip by copolymerization. BioTechniques 27:592-600.

31. MacBeath, G. and S.L. Schreiber. 2000. Printing proteins as microarrays for high-throughput function determination. Science 289:1760-1763.

32. B Schweitzer, S Wiltshire, J Lambert, S O'Malley, K Kukanskis, Z Zhu, SF Kingsmore, PM Lizardi and DC Ward, 2000. Immunoassays with rolling circle DNA amplification: a versatile platform for ultrasensitive antigen detection. Proc Natl Acad Sci USA 97 :10113–10119

33. B.B. Haab, M.J. Dunham and P.O. Brown , Protein microarrays for highly parallel detection and quantitation of specific proteins and antibodies in complex solutions. Genome Biol. 2 (2001), p. R4.

34. T.O. Joos, M. Schrenk, P. Hopfl, K. Kroger, U. Chowdhury, D. Stoll, D. Schorner, M. Durr, K. Herick, S. Rupp et al., A microarray enzyme-linked immunosorbent assay for autoimmune diagnostics. Electrophoresis 21 (2000), pp. 2641–2650.

35. A. Sreekumar, M.K. Nyati, S. Varambally, T.R. Barrette, D. Ghosh, T.S. Lawrence and A.M. Chinnaiyan , Profiling of cancer cells using protein microarrays: discovery of novel radiation-regulated proteins. Cancer Res. 61 (2001), pp. 7585–7593.

36. H Zhu, JF Klemic, S Chang, P Bertone, A Casamayor, KG Klemic, D Smith, M Gerstein, MA Reed and M Snyder, Analysis of yeast protein kinases using protein chips. Nat Genet 26 (2000), pp. 283–289

37. Mitchell, D.A., Marshall, T.K. & Deschenes, R.J. Vector for the inducible overexpression of glutathione S-transferase fusion protein in yeast. Yeast 9, 715–723 (1993).

38.  Rogers YH, Jiang-Baucom P, Huang ZJ, Bogdanov V, Anderson S, Boyce-Jacino MT. Immobulization of oligonucleotides onto a glass support via disulfide bonds: a method for preparation of DNA microarrays. Anal. Biochem. 266, 23–30 (1999).

39. Afanassiev V, Hanemann V, Wolf S: Preparation of DNA and protein microarrays on glass slides coated with an agarose film. Nucleic Acids Res. 28 12, e66 (2002).
40. Lofas S, Johnsson B, Tegendahl K, Ronnberg I: Dextran modified gold surfaces
for surface plasmon resonance sensors; immunoreactivity of immobilized antibodies and antibody-surface interaction studies. J. Colloid Interface Sci. 65, 423-431 (1993).

41. Haab BB, Dunham MJ, Brown PO: Protein microarrays for highly parallel detection and quantitation of specific proteins and antibodies in complex solutions. Genome
Biology 2, 0004.1-0004.13 (2001).

42. H. Ge , UPA, a universal protein array system for quantitative detection of protein-protein, protein-DNA, protein-RNA and protein-ligand interactions. Nucleic Acids Res. 28 (2000), p. e3.

43. R.M. De Wildt, C.R. Mundy, B.D. Gorick and I.M. Tomlinson , Antibody arrays for high-throughput screening of antibody-antigen interactions. Nat. Biotechnol. 18 (2000), pp. 989–994.

44. G. MacBeath, A.N. Koehler and S.L. Schreiber , Printing small molecules as microarrays and detecting protein-ligand interactions en masse. J. Am. Chem. Soc. 121 (1999), pp. 7967–7968.

45. S. Heyse, H. Vogel, M. Sanger and H. Sigrist , Covalent attachment of functionalized lipid bilayers to planar waveguides for measuring protein binding to biomimetic membranes. Protein Sci. 4 (1995), pp. 2532–2544.

46. C. Bieri, O.P. Ernst, S. Heyse, K.P. Hofmann and H. Vogel , Micropatterned immobilization of a G protein-coupled receptor and direct detection of G protein activation. Nat. Biotechnol. 17 (1999), pp. 8105–8110.

47. B.T. Houseman, J.H. Huh, S.J. Kron and M. Mrksich , Peptide chips for the quantitative evaluation of protein kinase activity. Nat. Biotechnol. 20 (2002), pp. 270–274.

48. C.D. Hodneland, Y.S. Lee, D.H. Min and M. Mrksich , Selective immobilization of proteins to self-assembled monolayers presenting active site-directed capture ligands. Proc. Natl. Acad. Sci. USA 99 (2002), pp. 5048–5052.

49. Burgener M, Sanger M, Candrian U: Synthesis of a stable and specific surface
plasmon resonance biosensor surface employing covalently immobilized peptide
nucleic acids. Bioconjug. Chem. 11, 749-754 (2000).

50. Eisen MB, Brown PO: DNA arrays for
analysis of gene expression. Methods
Enzymol. 303, 179-205 (1999).

51. Fodor SPA, Read JL, Pirrung MC, Stryer L,
Liu AT, Solas D: Light directed, spatially addressable parallel chemical synthesis.
Science 251, 767-773 (1991).
52. Mooney JF, Hunt AJ, McIntosh JR, Liberko CA, Walba DM, Rogers CT. Patterning of functional antibodies and other proteins by photolithography of silane monolayers.
Proc Natl Acad Sci U S A. 1996 Oct 29;93(22):12287-91.

53. Frank R: SPOT synthesis: an easy technique for the positionally addressable, parallel
chemical synthesis on a membrane support. Tetrahedron 48, 9217-9232 (1992).

54. D. Stoll, M.F. Templin, M. Schrenk, P.C. Traub, C.F. Vohringer and T.O. Joos , Protein microarray technology. Front Biosci. 7 (2002), pp. c13–c32.

55. P. Arenkov, A. Kukhtin, A. Gemmell, S. Voloshchuk, V. Chupeeva and A. Mirzabekov , Protein microchips: use for immunoassay and enzymatic reactions. Anal. Biochem. 278 (2000), pp. 123–131.

56. B.B. Haab , Advances in protein microarray technology for protein expression and interaction profiling. Curr. Opin. Drug Disc. Dev. 4 (2001), pp. 116–123.

57. P.M. Lizardi, X. Huang, Z. Zhu, P. Bray-Ward, D.C. Thomas and D.C. Ward , Mutation detection and single-molecule counting using isothermal rolling-circle amplification. Nat. Genet. 19 (1998), pp. 225–232.



Science News

For science news click here:Science News